Package: taxalight 0.1.5

taxalight: A Lightweight and Lightning-Fast Taxonomic Naming Interface

Creates a local Lightning Memory-Mapped Database ('LMDB') of many commonly used taxonomic authorities and provides functions that can quickly query this data. Supported taxonomic authorities include the Integrated Taxonomic Information System ('ITIS'), National Center for Biotechnology Information ('NCBI'), Global Biodiversity Information Facility ('GBIF'), Catalogue of Life ('COL'), and Open Tree Taxonomy ('OTT'). Name and identifier resolution using 'LMDB' can be hundreds of times faster than either relational databases or internet-based queries. Precise data provenance information for data derived from naming providers is also included.

Authors:Carl Boettiger [aut, cre], Kari Norman [aut]

taxalight_0.1.5.tar.gz
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taxalight.pdf |taxalight.html
taxalight/json (API)
NEWS

# Install 'taxalight' in R:
install.packages('taxalight', repos = c('https://cboettig.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/cboettig/taxalight/issues

On CRAN:

taxonomy

5 exports 5 stars 1.12 score 13 dependencies 4 scripts 375 downloads

Last updated 3 years agofrom:e572724253. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 25 2024
R-4.5-winOKAug 25 2024
R-4.5-linuxOKAug 25 2024
R-4.4-winOKAug 25 2024
R-4.4-macOKAug 25 2024
R-4.3-winOKAug 25 2024
R-4.3-macOKAug 25 2024

Exports:get_idsget_namestltl_createtl_dir

Dependencies:askpasscontentidcurldigestfshttrjsonlitemimeopensslR6storrsysthor