Package: pmc 1.0.6

pmc: Phylogenetic Monte Carlo

Monte Carlo based model choice for applied phylogenetics of continuous traits. Method described in Carl Boettiger, Graham Coop, Peter Ralph (2012) Is your phylogeny informative? Measuring the power of comparative methods, Evolution 66 (7) 2240-51. <doi:10.1111/j.1558-5646.2011.01574.x>.

Authors:Carl Boettiger [aut, cre]

pmc_1.0.6.tar.gz
pmc_1.0.6.zip(r-4.5)pmc_1.0.6.zip(r-4.4)pmc_1.0.6.zip(r-4.3)
pmc_1.0.6.tgz(r-4.4-any)pmc_1.0.6.tgz(r-4.3-any)
pmc_1.0.6.tar.gz(r-4.5-noble)pmc_1.0.6.tar.gz(r-4.4-noble)
pmc_1.0.6.tgz(r-4.4-emscripten)pmc_1.0.6.tgz(r-4.3-emscripten)
pmc.pdf |pmc.html✨
pmc/json (API)
NEWS

# Install 'pmc' in R:
install.packages('pmc', repos = c('https://cboettig.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/cboettig/pmc/issues

Datasets:
  • anoles - The anoles data set
  • tree - The phylogeny for the anoles data set

On CRAN:

4.60 score 2 stars 10 scripts 372 downloads 4 mentions 2 exports 64 dependencies

Last updated 1 years agofrom:2b0b649879. Checks:7 OK. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 25 2025
R-4.5-winOKJan 25 2025
R-4.5-linuxOKJan 25 2025
R-4.4-winOKJan 25 2025
R-4.4-macOKJan 25 2025
R-4.3-winOKJan 25 2025
R-4.3-macOKJan 25 2025

Exports:pmcpmc_fit

Dependencies:apecliclusterGenerationcodacodetoolscolorspacecombinatcpp11DEoptimdeSolvedigestdoParalleldplyrexpmfansifarverfastmatchforeachgeigergenericsggplot2gluegtableigraphisobanditeratorslabelinglatticelifecyclemagrittrmapsMASSMatrixmgcvmnormtmunsellmvtnormncbitnlmenumDerivoptimParallelouchphangornphytoolspillarpkgconfigpurrrquadprogR6RColorBrewerRcpprlangscalesscatterplot3dstringistringrsubplextibbletidyrtidyselectutf8vctrsviridisLitewithr

pmc tutorial

Carl Boettiger

Rendered frompmc_tutorial.Rmdusingknitr::rmarkdownon Jan 25 2025.

Last update: 2023-04-04
Started: 2015-06-23