Package: pmc 1.0.6

pmc: Phylogenetic Monte Carlo

Monte Carlo based model choice for applied phylogenetics of continuous traits. Method described in Carl Boettiger, Graham Coop, Peter Ralph (2012) Is your phylogeny informative? Measuring the power of comparative methods, Evolution 66 (7) 2240-51. <doi:10.1111/j.1558-5646.2011.01574.x>.

Authors:Carl Boettiger [aut, cre]

pmc_1.0.6.tar.gz
pmc_1.0.6.zip(r-4.7)pmc_1.0.6.zip(r-4.6)pmc_1.0.6.zip(r-4.5)
pmc_1.0.6.tgz(r-4.6-any)pmc_1.0.6.tgz(r-4.5-any)
pmc_1.0.6.tar.gz(r-4.7-any)pmc_1.0.6.tar.gz(r-4.6-any)
pmc_1.0.6.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
pmc/json (API)
NEWS

# Install 'pmc' in R:
install.packages('pmc', repos = c('https://cboettig.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/cboettig/pmc/issues

Datasets:
  • anoles - The anoles data set
  • tree - The phylogeny for the anoles data set

On CRAN:

Conda:

4.64 score 2 stars 11 scripts 277 downloads 4 mentions 2 exports 62 dependencies

Last updated from:2b0b649879. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK229
source / vignettesOK203
linux-release-x86_64OK213
macos-release-arm64OK143
macos-oldrel-arm64OK111
windows-develOK161
windows-releaseOK149
windows-oldrelOK201
wasm-releaseOK128

Exports:pmcpmc_fit

Dependencies:apecliclusterGenerationcodacodetoolscolorspacecombinatcpp11DEoptimdeSolvedigestdoParalleldplyrexpmfarverfastmatchforeachgeigergenericsggplot2gluegtableigraphisobanditeratorslabelinglatticelifecyclemagrittrmapsMASSMatrixmnormtmvtnormncbitnlmenumDerivoptimParallelouchphangornphytoolspillarpkgconfigpurrrquadprogR6RColorBrewerRcpprlangS7scalesscatterplot3dstringistringrsubplextibbletidyrtidyselectutf8vctrsviridisLitewithr

pmc tutorial

Carl Boettiger

Rendered frompmc_tutorial.Rmdusingknitr::rmarkdownon May 18 2026.

Last update: 2023-04-04
Started: 2015-06-23